Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908197.1_cds_XP_016458301.1_51943
CDS Infomation

[gene=LOC107781987] [db_xref=GeneID:107781987] [protein=probable protein phosphatase 2C 5] [protein_id=XP_016458301.1] [location=complement(join(96333..96552,97369..97592,97680..97805,97891..97998,98105..98322,98430..98601,98717..98932))] [gbkey=CDS]
Sequence

ATGAGTAGGGCGGAGTTTACGAGGATGAAGCAAAAGGCAGCTCCAGTACCGCTAGGGACT
CTTATCAGTCGTGAACTGCGGAATGACAATGTAGAGAAGCCTACGGTGAAGTACGGGCAG
GCTGGTTTGGCCAAGAAAGGAGAAGATTATTTCTTGGTCAGGCCTGATTGCCAGAGGATT
CCGGGGAATACATCCACATACTTTTCTGTTTTCGCGATCCTTGATGGGCATAATGGTATA
TCAGCTGCTATATTCACGAAAGAGAATTTATTGAACAATGTATTGAGTGCTATTCTTCAA
GGACTTGATAGAGAAGAGTGGCTCCAAGCCCTTCCTCGCGCACTAGTTGCTGGTTTTGTG
AAAACTGATATAGAGTTTCAGCAAAAAGGTGAGACATCTGGAACTACTGTTACCTTTGTT
GTGATCGATGGGTGGACGATTACTGTCGCATCTGTTGGAGATTCTCGGTGCATATTAGAC
ACCCAAGAAGGTGTGGTCTCTTTGTTGACTGTTGACCATCGATTGGAAGAAAACGAAGAG
GAACGCCAGCGTGTAACCGCAAGTGGTGGTGAAGTAGGAAGGCTCAATATTTTTGGCGGT
AATGAGGTTGGGCCTCTGCGTTGCTGGCCTGGTGGATTGTGCCTATCAAGGTCAATTGGT
GATACAGATGTTGGGGAGTTTATTGTTCCAATACCTCATGTTAAGCAAGTGAAGCTTTCA
AATGCTGGGGGAAGGCTTATTATTGCCTCTGATGGTATATGGGATGCTTTATCATCTGAT
TTGGCAGCACAATCTTGCAGAGGTTTGCCAGCAGATCTCGCTGCGAAGATGGTTGTGAAG
GAGGCTCTAAGGTCACGAGGTCTGAAAGATGATACAACCTGCTTGGTTGTTGATATTATT
CCTTATGATCATCTTGTCTTGCCTCCAACACCTAGGAAAAAGCAAAATTTGTTCAGTTCA
TTTATCTATGGGAAGATATCACAAAATTCAAGATCGAAAAAGCTTTCTACTGTTGGTATT
GTGGAGGAATTATTTGAAGAGGGCTCTGCAATGCTTGCTGAGAGGCTTGGTAAAGATTTT
CCTTTGAACTCTAGCTCTGGGCTCTTCAGATGTGCTATTTGTCAAGTTGATCAGCCAGCA
AGTGAAGGTTTATCTGTTAACTCCGGCCCTTTCTTCTCACCTGTGTCAAAGCCATGGGAA
GGTCCATTCCTGTGCGCAAATTGCCGTAGGAAGAAAGATGCAATGGAAGGCAAAAGGCCT
AGTAGAGCTGCACTAACTGCTTGA

Peptide Sequence

PEP ID

XP_016458301.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 5 [Nicotiana tabacum]
Sequence

MSRAEFTRMKQKAAPVPLGTLISRELRNDNVEKPTVKYGQAGLAKKGEDYFLVRPDCQRI
PGNTSTYFSVFAILDGHNGISAAIFTKENLLNNVLSAILQGLDREEWLQALPRALVAGFV
KTDIEFQQKGETSGTTVTFVVIDGWTITVASVGDSRCILDTQEGVVSLLTVDHRLEENEE
ERQRVTASGGEVGRLNIFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLS
NAGGRLIIASDGIWDALSSDLAAQSCRGLPADLAAKMVVKEALRSRGLKDDTTCLVVDII
PYDHLVLPPTPRKKQNLFSSFIYGKISQNSRSKKLSTVGIVEELFEEGSAMLAERLGKDF
PLNSSSGLFRCAICQVDQPASEGLSVNSGPFFSPVSKPWEGPFLCANCRRKKDAMEGKRP
SRAALTA

Transcript Sequence

Gene sequence data has not been registered.